Here is a typical structure for a batch script
1. {{{Code to set up parameters across all the datasets
and do bits of analysis that are can be grouped
}}}
1. {{{Loop over Subjects and Sessions
and perform the Main Crunch
}}}
E.g.
1.#1 {{{
% reorientation, slice timing
do_time_place5
realign_spm5
smooth_spm5
% hp filter
MYV.hf_cut = 60;
}}}
1. {{{
% Run models
for sb = 1:length(MYV.subjects)
for ss = 1:length(MYV.sesses)
one_sub_sess_model_moves5(MYV, sb, ss);
one_sub_sess_con_moves5(MYV, sb, ss);
end
end
}}}
Here
''do_time_place<
>
realign_spm5<
>
smooth_spm5<
>
one_sub_sess_model_moves5'' (OneSubSess)<
>
and
''one_sub_sess_con_moves5<
>''
are subscripts tailored to specialised parts of the sequence.
----