<?xml version="1.0" encoding="utf-8"?><!DOCTYPE article  PUBLIC '-//OASIS//DTD DocBook XML V4.4//EN'  'http://www.docbook.org/xml/4.4/docbookx.dtd'><article><articleinfo><title>FmDownload</title><revhistory><revision><revnumber>6</revnumber><date>2013-03-07 21:22:58</date><authorinitials>localhost</authorinitials><revremark>converted to 1.6 markup</revremark></revision><revision><revnumber>5</revnumber><date>2007-01-29 17:39:56</date><authorinitials>RhodriCusack</authorinitials></revision><revision><revnumber>4</revnumber><date>2006-07-27 15:43:38</date><authorinitials>RhodriCusack</authorinitials></revision><revision><revnumber>3</revnumber><date>2006-07-27 14:49:54</date><authorinitials>devel01.mrc-cbu.cam.ac.uk</authorinitials></revision><revision><revnumber>2</revnumber><date>2006-07-27 14:34:58</date><authorinitials>devel01.mrc-cbu.cam.ac.uk</authorinitials></revision><revision><revnumber>1</revnumber><date>2006-07-04 15:00:14</date><authorinitials>Scripting Subsystem</authorinitials></revision></revhistory></articleinfo><informaltable><tgroup cols="1"><colspec colname="col_0" colwidth="100*"/><tbody><row rowsep="1"><entry colsep="1" rowsep="1"><para><emphasis role="strong">Using a field-map to undistort EPIs</emphasis></para><para><ulink url="https://lsr-wiki-01.mrc-cbu.cam.ac.uk/imaging/FmDownload/imaging/FmBackground#">Background</ulink></para><para><ulink url="https://lsr-wiki-01.mrc-cbu.cam.ac.uk/imaging/FmDownload/imaging/FmPower#">Improvement in power!</ulink></para><para><ulink url="https://lsr-wiki-01.mrc-cbu.cam.ac.uk/imaging/FmDownload/imaging/FmFieldmaps#">Acquiring fieldmaps</ulink></para><para><link linkend="">Download</link></para><para><ulink url="https://lsr-wiki-01.mrc-cbu.cam.ac.uk/imaging/FmDownload/imaging/FmRequirements#">What you'll need to undistort an EPI data series</ulink></para><para><ulink url="https://lsr-wiki-01.mrc-cbu.cam.ac.uk/imaging/FmDownload/imaging/FmReference#">Guide and reference</ulink></para><para><ulink url="https://lsr-wiki-01.mrc-cbu.cam.ac.uk/imaging/FmDownload/imaging/FmExample#">Step-by-step example</ulink></para><para><ulink url="https://lsr-wiki-01.mrc-cbu.cam.ac.uk/imaging/FmDownload/imaging/FmBatch#">Batch mode</ulink></para></entry></row></tbody></tgroup></informaltable><section><title>Download</title><section><title>What software you'll need</title><para>Matlab </para><para>SPM 99 or above </para><para>If you are using Bruker format input files, a Perl interpreter (e.g, from cygwin.com) </para><para>If you wish to compile the code, you'll need Perl and gcc or cxx, or a love of the joy of programming. </para></section><section><title>What data you'll need</title><para>Field maps (see 'Acquiring fieldmaps' above) </para><para>Echo planar functional data in Analyze format </para></section><section><title>Licensing</title><para>If you are an academic user you may download this software for free immediately: please first download a <ulink url="http://www.mrc-cbu.cam.ac.uk/~rhodri/undistortion_source_licence2007.pdf">license form</ulink>. Before you download the software, please sign and return two copies of the appropriate form. </para><para>If you are a commercial user please email <ulink url="mailto:rhodri.cusack@mrc.cbu.cam.ac.uk">rhodri.cusack@mrc.cbu.cam.ac.uk</ulink> </para></section><section><title>Download version 3.03</title><para><ulink url="http://imaging.mrc-cbu.cam.ac.uk/downloads/fmu/fmu_siemens_exampledataset.tar">Siemens example dataset (2MB)</ulink> </para><para><ulink url="http://imaging.mrc-cbu.cam.ac.uk/downloads/fmu/fmu_exampledataset.tar">Bruker Example dataset (111MB)</ulink> </para><para><ulink url="http://imaging.mrc-cbu.cam.ac.uk/downloads/fmu/fmu_v3p03_solaris.tar">Sun (solaris) (4MB)</ulink> </para><para><ulink url="http://imaging.mrc-cbu.cam.ac.uk/downloads/fmu/fmu_v3p03_linux.tar">Linux (Red Hat) (4MB)</ulink> </para><para><ulink url="http://imaging.mrc-cbu.cam.ac.uk/downloads/fmu/fmu_v3p03_windows.tar">Windows (4MB)</ulink> </para><para><ulink url="http://imaging.mrc-cbu.cam.ac.uk/downloads/fmu/fmu_v3p03_withsrc.tar">Source code (all platforms, requires Perl, and either GCC or MS Visual Studio or CXX) (17MB)</ulink> </para></section></section></article>