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== Notes on Scripting, Batching and Tasking for SPM5 ==

 * '''Why Script?'''
 
  * A large part of SPM code is complex housekeeping related to files and directories
  
  * Tailoring requires attention to these housekeeping matters

   * ''Have I got the right files?''

  * Need to create novel suite of analyses out of a number of core modules

  * Intercommunication via the SPM.mat structure

  ["MYV"]

  ["MYV"]

  '''BitOfScript'''

  '''AllGorySpmMat'''
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BatchRenderRfx ---- /!\ '''Edit conflict - other version:''' ----
  * Why Batch?
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BatchScripting ---- /!\ '''Edit conflict - your version:''' ----
  * Why Batch?

---- /!\ '''End of edit conflict''' ----

  * Need to perform same or similar analyses on several datasets

 * Spm5Tasks
 
  * How to access them

  * What they do

  * Job/task manager can be extended

  * ''To be clarified: there may be some undocumented functionality for linking up tasks in sequence so that output of one task become the input to the next.'''
  
 ["Jobs3"]

 * Other approaches

  * aa -- Rhodri Cusack's Automatic Analysis modules

   * AutomaticAnalysisIntroduction

PetModelAutomation5

Notes on Scripting, Batching and Tasking for SPM5

  • Why Script?

    • A large part of SPM code is complex housekeeping related to files and directories
    • Tailoring requires attention to these housekeeping matters

      • Have I got the right files?

    • Need to create novel suite of analyses out of a number of core modules
    • Intercommunication via the SPM.mat structure ["MYV"] ["MYV"]

      BitOfScript

      AllGorySpmMat

/!\ Edit conflict - other version:

  • Why Batch?

/!\ Edit conflict - your version:

  • Why Batch?

/!\ End of edit conflict

  • Need to perform same or similar analyses on several datasets

  • Spm5Tasks

    • How to access them
    • What they do
    • Job/task manager can be extended

    • To be clarified: there may be some undocumented functionality for linking up tasks in sequence so that output of one task become the input to the next.

    ["Jobs3"]
  • Other approaches

PetModelAutomation5

CbuImaging: ScriptingNotes (last edited 2013-03-07 21:23:05 by localhost)