Diff for "ScriptingNotes" - MRC CBU Imaging Wiki

Differences between revisions 17 and 19 (spanning 2 versions)

Notes on Scripting, Batching and Tasking for SPM5

Why Script?
- A large part of SPM code is complex housekeeping related to files and directories
- Tailoring requires attention to these housekeeping matters
  - Have I got the right files?
- Need to create novel suite of analyses out of a number of core modules
- Intercommunication via the SPM.mat structure ["MYV"]
  AllGorySpmMat
Why Batch?
- Need to perform same or similar analyses on several datasets
  BitOfScript
- Spm5Tasks
- How to access them
- What they do
- Job/task manager can be extended
- To be clarified: there may be some undocumented functionality for linking up tasks in sequence so that output of one task become the input to the next.
["Jobs3"]
Other approaches
aa -- Rhodri Cusack's Automatic Analysis modules
AutomaticAnalysisIntroduction

-  ⇤ ← Revision 17 as of 2006-10-02 11:12:03 → 
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+   ← Revision 19 as of 2006-10-02 11:14:36 → ⇥
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-  ["MYV"]
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 * Why Batch?

  * Need to perform same or similar analyses on several datasets
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-  '''AllGorySpmMat'''


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  * Why Batch?

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  * Why Batch?

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  * Need to perform same or similar analyses on several datasets

 * Spm5Tasks
+  * Spm5Tasks