Diff for "SpmInformation" - MRC CBU Imaging Wiki
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= Information on using and tuning SPM = This is a practical guide to using SPM. If you're after theory, you might want the Analysis Principles section from the menu on the left.
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 * SpmInfo
 * SpmQuickStart
 * SpmVersions
= Getting started with SPM =

 * SpmVersions - and how to launch them at the CBU

= SPM tips and tools =

 * [http://www.sph.sc.edu/comd/rorden/mritut.html Normalizing anatomical MRI scans of damaged brains] using SPM and MRIcro.
 * MaskedEpiNormalization - using the EPIs for spatial normalization.
 * SpmPlottingAdjustedData
 * DisplaySlices - display multiple image slices with activation data using matlab / SPM
 * Changing the location of images in an SPM design with SpmAnaCd
 * SpmTips - not otherwise classified tips and fixes

= Automating SPM =
 * [:AutomaticAnalysisIntroduction:aa] - automating SPM analyses
 * SpmBatch - batching SPM jobs

= Programming with SPM =
 * SpmGraphics - using the SPM output graphics for making figures
 * TrimmingImages using SPM
 * [http://www-psych.stanford.edu/~kalina/SPM99/ Kalina Christoff's SPM99 page] - a variety of interesting programs, protocols and discussions.
 * BasicProgrammingWithSpm
 * SpmManuals

= Benchmarking SPM =
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 * SpmBatchSpm2
 * SpmBatchSpm5
 * [wiki:AutomaticAnalysisIntroduction AaBatching]
 * SpmTips
 * SpmManuals
 * TestsNewConfigJuly2009 - testing different configurations of Linux with various neuroimaging packages



For help on SPM and other analysis topics, see AnalysisHelp

This is a practical guide to using SPM. If you're after theory, you might want the Analysis Principles section from the menu on the left.

Getting started with SPM

SPM tips and tools

Automating SPM

  • [:AutomaticAnalysisIntroduction:aa] - automating SPM analyses

  • SpmBatch - batching SPM jobs

Programming with SPM

Benchmarking SPM

For help on SPM and other analysis topics, see AnalysisHelp

CbuImaging: SpmInformation (last edited 2013-04-24 13:41:20 by TiborAuer)