|
Size: 7148
Comment:
|
← Revision 86 as of 2020-10-01 09:42:59 ⇥
Size: 8001
Comment:
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 6: | Line 6: |
| 1) state-of-the-art analysis tools for high-quality research, | 1. state-of-the-art analysis tools for high-quality research, |
| Line 8: | Line 8: |
| 2) skills that increase their efficiency and independence, | 1. skills that increase their efficiency and independence, |
| Line 10: | Line 10: |
| 3) knowledge that enables them to critically evaluate neuroimaging literature, as well as with | 1. knowledge that enables them to critically evaluate neuroimaging literature |
| Line 12: | Line 12: |
| 4) transferrable skills that can be useful outside academia. | 1. transferrable skills that can be useful outside academia. |
| Line 16: | Line 16: |
| The specific components of our core skills-oriented training programme are: | The core components of our '''skills-oriented training programme''' are: |
| Line 18: | Line 18: |
| 1) [[http://imaging.mrc-cbu.cam.ac.uk/methods/MatlabLecturesSchedule|Introduction to Matlab and Scientific Computing]]: An introduction to Matlab, Linux, and the CBU computing system, including theory and hands-on practice. | 1. '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/MatlabLecturesSchedule|Introduction to Scientific Computing and Good Research Practice]]''': An introduction to Best Practice in Scientific Computing, Linux, command line interfaces, the CBU computing system, and principles of reproducible science. This includes theory and hands-on practice. |
| Line 20: | Line 20: |
| 2) [[http://imaging.mrc-cbu.cam.ac.uk/methods/SignalAnalysisMatlabSchedule|Introduction to Signal Analysis in Matlab]]: Introduction to basic concepts of signal processing relevant to neuroimaging analysis, with hands-on practice in Matlab. | 1. '''[[https://pybrain-workshop.github.io/|PyBrain - Introduction to Neuroimaging in Python]]''': A series of online workshops by several external experts on the stimulus presentation, MRI, fMRI and EEG/MEG analysis in Python. ''' ''' |
| Line 22: | Line 22: |
| 3) [[http://imaging.mrc-cbu.cam.ac.uk/methods/IntroductionNeuroimagingLectures|Introduction to Neuroimaging Methods]]: Lectures and hands-on workshops on central aspects of (f)MRI and EEG/MEG analysis, from data acquisition over pre-processing to statistics. This also includes a lecture on brain stimulation techniques. | 1. '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/IntroductionNeuroimagingLectures|Introduction to Neuroimaging Methods]]''': Lectures and hands-on workshops on central aspects of (f)MRI and EEG/MEG analysis, from data acquisition over pre-processing to statistics. Software will be based on Python and Matlab. This also includes a lecture on brain stimulation techniques. ''' ''' |
| Line 24: | Line 24: |
| 4) [[http://www.mrc-cbu.cam.ac.uk/seminar-information/statistics-seminars/|Statistical Methods for Cognitive Psychologists]]: Lectures on theory and applications of statistical methods in cognitive science aimed at new PhD students. | 1. '''[[http://www.mrc-cbu.cam.ac.uk/seminar-information/statistics-seminars/|Statistical Methods for Cognitive Psychologists]]''': Lectures on theory and applications of statistical methods in cognitive science aimed at new PhD students. ''' ''' |
| Line 26: | Line 26: |
| These workshops are complemented by a number of one-off workshops on selected topics, e.g. on statistics in R and specific neuroimaging analysis software. | These workshops are complemented by a number of one-off workshops on selected topics, e.g. on statistics in R and specific neuroimaging analysis software. ''' ''' |
| Line 28: | Line 28: |
| Courses are taught at the CBU by a diverse team of tutors from the Cambridge neuroscience community, who are at the forefront of their research areas. Our training programme also provides a welcome opportunity to gain teaching experience for junior researchers. | Courses are taught at the CBU by a diverse team of tutors from the Cambridge neuroscience community, who are at the forefront of their research areas. Our training programme also provides a welcome opportunity to gain teaching experience for junior researchers. ''' ''' |
| Line 30: | Line 30: |
| For more information, subscribe to our [[http://lists.mrc-cbu.cam.ac.uk/mailman/listinfo/skillstraining|skills-training mailing list]] (Non-CBU people can subscribe by sending an e-mail to skillstraining-subscribe (at) mrc-cbu (dot) cam (dot) ac (dot) uk), or contact [[http://www.mrc-cbu.cam.ac.uk/people/olaf.hauk/|Olaf Hauk]]. | For more information, subscribe to our '''[[http://lists.mrc-cbu.cam.ac.uk/mailman/listinfo/skillstraining|skills-training mailing list]]''' (Non-CBU people can subscribe by sending an e-mail to skillstraining-subscribe (at) mrc-cbu (dot) cam (dot) ac (dot) uk), or contact [[http://www.mrc-cbu.cam.ac.uk/people/olaf.hauk/|Olaf Hauk]]. ''' ''' |
| Line 33: | Line 33: |
| Elementary Mathematics for Biologists: http://www.bio.cam.ac.uk/teaching/emb/, http://www.bio.cam.ac.uk/teaching/emb/documents_files/EMB_synopsis.pdf | Elementary Mathematics for Biologists: http://www.bio.cam.ac.uk/teaching/emb/, http://www.bio.cam.ac.uk/teaching/emb/documents_files/EMB_synopsis.pdf ''' ''' |
| Line 35: | Line 35: |
| Mathematical Biology: http://www.plantsci.cam.ac.uk/teaching/mb/index.html http://www.plantsci.cam.ac.uk/teaching/mb/synopses.html | Mathematical Biology: http://www.plantsci.cam.ac.uk/teaching/mb/index.html http://www.plantsci.cam.ac.uk/teaching/mb/synopses.html ''' ''' |
| Line 38: | Line 38: |
| Introduction to Neuroimaging Methods (lectures and workshops at CBU): http://imaging.mrc-cbu.cam.ac.uk/methods/IntroductionNeuroimagingLectures | Introduction to Neuroimaging Methods (lectures and workshops at CBU): http://imaging.mrc-cbu.cam.ac.uk/methods/IntroductionNeuroimagingLectures ''' ''' |
| Line 40: | Line 40: |
| SPM lectures: http://imaging.mrc-cbu.cam.ac.uk/imaging/SpmMiniCourse http://www.talks.cam.ac.uk/show/archive/12102 | SPM lectures: https://www.fil.ion.ucl.ac.uk/spm/course/video/ http://imaging.mrc-cbu.cam.ac.uk/imaging/SpmMiniCourse ''' ''' |
| Line 42: | Line 42: |
| Wolfson Brain Imaging Centre: http://www.wbic.cam.ac.uk/, courses: http://www.wbic.cam.ac.uk/courses | SPM software courses: https://www.fil.ion.ucl.ac.uk/spm/course/ |
| Line 44: | Line 44: |
| SPM, FSL and other courses: http://www.neurometrika.org/ | Wolfson Brain Imaging Centre: http://www.wbic.cam.ac.uk/, courses: http://www.wbic.cam.ac.uk/courses ''' ''' |
| Line 46: | Line 46: |
| Cambridge Connectome Consortium (CCC): http://imaging.mrc-cbu.cam.ac.uk/imaging/CCC | SPM, FSL and other courses: http://www.neurometrika.org/ ''' ''' Cambridge Connectome Consortium (CCC): http://imaging.mrc-cbu.cam.ac.uk/imaging/CCC ''' ''' |
| Line 49: | Line 51: |
| Cambridge Machine Learning Group: http://mlg.eng.cam.ac.uk/ (scroll down for courses) | Matlab for Psychologists and Neuroscientists (with links to more resources): https://uk.mathworks.com/academia/courseware/teaching-psychology-and-neuroscience-with-matlab.html ''' ''' |
| Line 51: | Line 53: |
| Machine Learning seminars at the Cambridge University Engineering Department: http://talks.cam.ac.uk/show/index/5397 http://videolectures.net/mlcued08_cambridge/ | Cambridge Machine Learning Group: http://mlg.eng.cam.ac.uk/ (scroll down for courses) ''' ''' Machine Learning seminars at the Cambridge University Engineering Department: http://talks.cam.ac.uk/show/index/5397 http://videolectures.net/mlcued08_cambridge/ ''' ''' |
| Line 54: | Line 58: |
| Matlab: [[MatlabLecturesSchedule|Introduction to Matlab at the CBU]] | Matlab: [[MatlabLecturesSchedule|Introduction to Matlab at the CBU]] ''' ''' |
| Line 56: | Line 60: |
| Online courses: [[http://www.codecademy.com/|Code Academy]], | Online courses: [[http://www.codecademy.com/|Code Academy]], [[https://matlabacademy.mathworks.com/|MatlabAcademy (Mathworks)]] ''' ''' |
| Line 58: | Line 62: |
| Cambridge University Computing Service Training: http://training.cam.ac.uk/ucs/ [[http://www.training.cam.ac.uk/ucs/;jsessionid=71F2136F52E820F82358D45F546680D4Theme|http://www.training.cam.ac.uk/ucs/]] | Cambridge University Computing Service Training: http://training.cam.ac.uk/ucs/ [[http://www.training.cam.ac.uk/ucs/;jsessionid=71F2136F52E820F82358D45F546680D4Theme|http://www.training.cam.ac.uk/ucs/]] ''' ''' |
| Line 60: | Line 64: |
| Computer Laboratory: http://www.cl.cam.ac.uk/teaching/ | Computer Laboratory: http://www.cl.cam.ac.uk/teaching/ ''' ''' |
| Line 62: | Line 66: |
| Introduction to Computer Science: http://www.hsps.cam.ac.uk/pps/current/undergraduate/Paperguides/Part1_2011-12/part1paper9.pdf (see e.g. "Lectures" section) | Introduction to Computer Science: http://www.hsps.cam.ac.uk/pps/current/undergraduate/Paperguides/Part1_2011-12/part1paper9.pdf (see e.g. "Lectures" section) ''' ''' |
| Line 65: | Line 69: |
| CBSU Statistics Lectures for Cognitive Scientists: http://www.mrc-cbu.cam.ac.uk/event-info/statistics-seminars/ (scroll down) | CBSU Statistics Lectures for Cognitive Scientists: http://www.mrc-cbu.cam.ac.uk/event-info/statistics-seminars/ (scroll down) ''' ''' |
| Line 67: | Line 71: |
| Statistics for Graduate Life Scientists: http://www.biomed.cam.ac.uk/gradschool/skills/mccabe.html | Statistics for Graduate Life Scientists: http://www.biomed.cam.ac.uk/gradschool/skills/mccabe.html ''' ''' |
| Line 69: | Line 73: |
| Cambridge Statistics Discussion Group (CSDG) seminars: http://www.mrc-cbu.cam.ac.uk/people/peter.watson/csdg.html | Cambridge Statistics Discussion Group (CSDG) seminars: http://www.mrc-cbu.cam.ac.uk/people/peter.watson/csdg.html ''' ''' |
| Line 71: | Line 75: |
| MRC Biostatistics Unit: http://www.mrc-bsu.cam.ac.uk/seminars.html | MRC Biostatistics Unit: http://www.mrc-bsu.cam.ac.uk/seminars.html ''' ''' |
| Line 73: | Line 77: |
| Centre for Applied Medical statistics (CAMS) http://www.phpc.cam.ac.uk/cams/ | Centre for Applied Medical statistics (CAMS) http://www.phpc.cam.ac.uk/cams/ ''' ''' |
| Line 75: | Line 79: |
| Statistical Laboratory Seminars: http://www.statslab.cam.ac.uk/Seminars | Statistical Laboratory Seminars: http://www.statslab.cam.ac.uk/Seminars ''' ''' |
| Line 77: | Line 81: |
| Cambridge University Statistics Clinic: http://talks.cam.ac.uk/show/index/21850 http://www.statslab.cam.ac.uk/clinic/ | Cambridge University Statistics Clinic: http://talks.cam.ac.uk/show/index/21850 http://www.statslab.cam.ac.uk/clinic/ ''' ''' |
| Line 80: | Line 84: |
| [[http://www.mrc-cbu.cam.ac.uk/seminar-information/|Research Seminars at the CBU]] (Chaucer Club, WLTS etc.) | [[http://www.mrc-cbu.cam.ac.uk/seminar-information/|Research Seminars at the CBU]] (Chaucer Club, WLTS etc.) ''' ''' |
| Line 82: | Line 86: |
| CBSU Interest Groups: http://imaging.mrc-cbu.cam.ac.uk/meg/CBUInterestGroups | CBSU Interest Groups: http://imaging.mrc-cbu.cam.ac.uk/meg/CBUInterestGroups ''' ''' |
| Line 84: | Line 88: |
| CBSU Graduate Seminars in Cognitive and Brain Sciences: http://www.mrc-cbu.cam.ac.uk/seminar-information/cambridge-graduate-programme/ | CBSU Graduate Seminars in Cognitive and Brain Sciences: http://www.mrc-cbu.cam.ac.uk/seminar-information/cambridge-graduate-programme/ ''' ''' |
| Line 86: | Line 90: |
| Experimental Psychology Graduate Programme: http://www.psychol.cam.ac.uk/currentpg | Experimental Psychology Graduate Programme: http://www.psychol.cam.ac.uk/currentpg ''' ''' |
| Line 88: | Line 92: |
| PPD Graduate Development Programme: http://www.training.cam.ac.uk/gdp/ | PPD Graduate Development Programme: http://www.training.cam.ac.uk/gdp/ ''' ''' |
| Line 90: | Line 94: |
| Cambridge Neuroscience: http://www.neuroscience.cam.ac.uk/ | Cambridge Neuroscience: http://www.neuroscience.cam.ac.uk/ ''' ''' |
| Line 92: | Line 96: |
| Kenneth Craig Club: http://talks.cam.ac.uk/show/index/5382 | Kenneth Craig Club: http://talks.cam.ac.uk/show/index/5382 ''' ''' |
| Line 94: | Line 98: |
| Zangwill Club: http://talks.cam.ac.uk/show/index/6342 | Zangwill Club: http://talks.cam.ac.uk/show/index/6342 ''' ''' |
| Line 96: | Line 100: |
| Graduate School of Life Sciences: http://www.biomed.cam.ac.uk/gradschool/skills.html | Graduate School of Life Sciences: http://www.biomed.cam.ac.uk/gradschool/skills.html ''' ''' |
| Line 98: | Line 102: |
| Experimental Psychology Undergraduate Programme: http://www.library.psychol.cam.ac.uk/ugptibbooklet | Experimental Psychology Undergraduate Programme: http://www.library.psychol.cam.ac.uk/ugptibbooklet ''' ''' |
| Line 100: | Line 104: |
| Psychology and Behavioural Sciences Undergraduate Programme: http://www.pbs.tripos.cam.ac.uk/structure/year1 | Psychology and Behavioural Sciences Undergraduate Programme: http://www.pbs.tripos.cam.ac.uk/structure/year1 ''' ''' |
| Line 102: | Line 106: |
| Natural Sciences Undergraduate Programme: http://www.study.cam.ac.uk/undergraduate/courses/natsci/part1a.html | Natural Sciences Undergraduate Programme: http://www.study.cam.ac.uk/undergraduate/courses/natsci/part1a.html ''' ''' |
| Line 105: | Line 109: |
| An abundant source of on-line courses: | An abundant source of on-line courses: ''' ''' |
| Line 107: | Line 111: |
| https://www.coursera.org/ | https://www.coursera.org/ ''' ''' |
| Line 109: | Line 113: |
| https://www.khanacademy.org/ | https://www.khanacademy.org/ ''' ''' |
| Line 111: | Line 115: |
| http://www.udacity.com/ | http://www.udacity.com/ ''' ''' |
| Line 113: | Line 117: |
| http://videolectures.net/ | http://videolectures.net/ ''' ''' |
| Line 115: | Line 119: |
| SPM courses: http://www.fil.ion.ucl.ac.uk/spm/course/ | SPM courses: http://www.fil.ion.ucl.ac.uk/spm/course/ ''' ''' |
| Line 117: | Line 121: |
| Martinos Center for Biomedical Imaging: http://cbs.lsdiv.harvard.edu/ncf/Education.htm (see e.g. "Short Courses" for 1- or 2-week courses on neuroimaging) | Martinos Center for Biomedical Imaging: http://cbs.lsdiv.harvard.edu/ncf/Education.htm (see e.g. "Short Courses" for 1- or 2-week courses on neuroimaging) ''' ''' |
| Line 119: | Line 123: |
| Fieldtrip (EEG/MEG analysis) workshops: http://fieldtrip.fcdonders.nl/workshop | Fieldtrip (EEG/MEG analysis) workshops: http://fieldtrip.fcdonders.nl/workshop ''' ''' |
| Line 121: | Line 125: |
| EEGlab workshops: http://sccn.ucsd.edu/eeglab/ (scroll down) | EEGlab workshops: http://sccn.ucsd.edu/eeglab/ (scroll down) ''' ''' |
| Line 123: | Line 127: |
| FSL: http://www.fmrib.ox.ac.uk/fslcourse/ (google for other venues) | FSL: http://www.fmrib.ox.ac.uk/fslcourse/ (google for other venues) ''' ''' |
Skills-oriented training opportunities at the CBU
We offer a comprehensive skills-oriented training programme for PhD students and post-doctoral researchers from interdisciplinary backgrounds. This includes modules on scientific computing and programming (Linux, Matlab), good research practice in scientific computing, signal processing in Matlab, and specialised neuroimaging workshops focussed on (f)MRI and EEG/MEG analysis.
Our programme provides junior researchers with
- state-of-the-art analysis tools for high-quality research,
- skills that increase their efficiency and independence,
- knowledge that enables them to critically evaluate neuroimaging literature
- transferrable skills that can be useful outside academia.
Most of our workshops are organised as block courses, in order to provide new starters with the necessary skills as early and efficiently as possible. The hands-on parts of our programme make use of 15 CBU laptops dedicated to training purposes.
The core components of our skills-oriented training programme are:
Introduction to Scientific Computing and Good Research Practice: An introduction to Best Practice in Scientific Computing, Linux, command line interfaces, the CBU computing system, and principles of reproducible science. This includes theory and hands-on practice.
PyBrain - Introduction to Neuroimaging in Python: A series of online workshops by several external experts on the stimulus presentation, MRI, fMRI and EEG/MEG analysis in Python.
Introduction to Neuroimaging Methods: Lectures and hands-on workshops on central aspects of (f)MRI and EEG/MEG analysis, from data acquisition over pre-processing to statistics. Software will be based on Python and Matlab. This also includes a lecture on brain stimulation techniques.
Statistical Methods for Cognitive Psychologists: Lectures on theory and applications of statistical methods in cognitive science aimed at new PhD students.
These workshops are complemented by a number of one-off workshops on selected topics, e.g. on statistics in R and specific neuroimaging analysis software.
Courses are taught at the CBU by a diverse team of tutors from the Cambridge neuroscience community, who are at the forefront of their research areas. Our training programme also provides a welcome opportunity to gain teaching experience for junior researchers.
For more information, subscribe to our skills-training mailing list (Non-CBU people can subscribe by sending an e-mail to skillstraining-subscribe (at) mrc-cbu (dot) cam (dot) ac (dot) uk), or contact Olaf Hauk.
Methods Foundations
Elementary Mathematics for Biologists: http://www.bio.cam.ac.uk/teaching/emb/, http://www.bio.cam.ac.uk/teaching/emb/documents_files/EMB_synopsis.pdf
Mathematical Biology: http://www.plantsci.cam.ac.uk/teaching/mb/index.html http://www.plantsci.cam.ac.uk/teaching/mb/synopses.html
Neuroimaging Methods
Introduction to Neuroimaging Methods (lectures and workshops at CBU): http://imaging.mrc-cbu.cam.ac.uk/methods/IntroductionNeuroimagingLectures
SPM lectures: https://www.fil.ion.ucl.ac.uk/spm/course/video/ http://imaging.mrc-cbu.cam.ac.uk/imaging/SpmMiniCourse
SPM software courses: https://www.fil.ion.ucl.ac.uk/spm/course/
Wolfson Brain Imaging Centre: http://www.wbic.cam.ac.uk/, courses: http://www.wbic.cam.ac.uk/courses
SPM, FSL and other courses: http://www.neurometrika.org/
Cambridge Connectome Consortium (CCC): http://imaging.mrc-cbu.cam.ac.uk/imaging/CCC
Signal Processing
Matlab for Psychologists and Neuroscientists (with links to more resources): https://uk.mathworks.com/academia/courseware/teaching-psychology-and-neuroscience-with-matlab.html
Cambridge Machine Learning Group: http://mlg.eng.cam.ac.uk/ (scroll down for courses)
Machine Learning seminars at the Cambridge University Engineering Department: http://talks.cam.ac.uk/show/index/5397 http://videolectures.net/mlcued08_cambridge/
Programming and Computing
Matlab: Introduction to Matlab at the CBU
Online courses: Code Academy, MatlabAcademy (Mathworks)
Cambridge University Computing Service Training: http://training.cam.ac.uk/ucs/ http://www.training.cam.ac.uk/ucs/
Computer Laboratory: http://www.cl.cam.ac.uk/teaching/
Introduction to Computer Science: http://www.hsps.cam.ac.uk/pps/current/undergraduate/Paperguides/Part1_2011-12/part1paper9.pdf (see e.g. "Lectures" section)
Statistics
CBSU Statistics Lectures for Cognitive Scientists: http://www.mrc-cbu.cam.ac.uk/event-info/statistics-seminars/ (scroll down)
Statistics for Graduate Life Scientists: http://www.biomed.cam.ac.uk/gradschool/skills/mccabe.html
Cambridge Statistics Discussion Group (CSDG) seminars: http://www.mrc-cbu.cam.ac.uk/people/peter.watson/csdg.html
MRC Biostatistics Unit: http://www.mrc-bsu.cam.ac.uk/seminars.html
Centre for Applied Medical statistics (CAMS) http://www.phpc.cam.ac.uk/cams/
Statistical Laboratory Seminars: http://www.statslab.cam.ac.uk/Seminars
Cambridge University Statistics Clinic: http://talks.cam.ac.uk/show/index/21850 http://www.statslab.cam.ac.uk/clinic/
Resources, Talks and Events for Cognitive Neuroscience
Research Seminars at the CBU (Chaucer Club, WLTS etc.)
CBSU Interest Groups: http://imaging.mrc-cbu.cam.ac.uk/meg/CBUInterestGroups
CBSU Graduate Seminars in Cognitive and Brain Sciences: http://www.mrc-cbu.cam.ac.uk/seminar-information/cambridge-graduate-programme/
Experimental Psychology Graduate Programme: http://www.psychol.cam.ac.uk/currentpg
PPD Graduate Development Programme: http://www.training.cam.ac.uk/gdp/
Cambridge Neuroscience: http://www.neuroscience.cam.ac.uk/
Kenneth Craig Club: http://talks.cam.ac.uk/show/index/5382
Zangwill Club: http://talks.cam.ac.uk/show/index/6342
Graduate School of Life Sciences: http://www.biomed.cam.ac.uk/gradschool/skills.html
Experimental Psychology Undergraduate Programme: http://www.library.psychol.cam.ac.uk/ugptibbooklet
Psychology and Behavioural Sciences Undergraduate Programme: http://www.pbs.tripos.cam.ac.uk/structure/year1
Natural Sciences Undergraduate Programme: http://www.study.cam.ac.uk/undergraduate/courses/natsci/part1a.html
External Events, Summer Schools, Workshops etc.
An abundant source of on-line courses:
SPM courses: http://www.fil.ion.ucl.ac.uk/spm/course/
Martinos Center for Biomedical Imaging: http://cbs.lsdiv.harvard.edu/ncf/Education.htm (see e.g. "Short Courses" for 1- or 2-week courses on neuroimaging)
Fieldtrip (EEG/MEG analysis) workshops: http://fieldtrip.fcdonders.nl/workshop
EEGlab workshops: http://sccn.ucsd.edu/eeglab/ (scroll down)
FSL: http://www.fmrib.ox.ac.uk/fslcourse/ (google for other venues)