MRI Physics in a Nutshell

ChristianSchwarzbauer

T1, T2, T2*, BOLD contrast, structural MRI, functional MRI (EPI)

cbu_spm_course_2007_cs.ppt

Biophysics of BOLD and common image artifacts

RhodriCusack

BOLD, susceptibility, fieldmaps, common artifacts

cbu_spm_course_2007_rc_biophysics.ppt

Spatial Preprocessing

MatthewBrett

realignment, normalisation, smoothing, segmenting

cbu_spm_course_2007_mb_spatial.ppt

The GLM and Friends

IanNimmoSmith

OLS, ML, EM, ReML, nonsphericity

cbu_spm_course_2007_ins.ppt

Convolution Models

RikHenson

HRF, temporal basis functions, highpass filter, autocorrelation, nonlinearity

cbu_spm_course_2007_rh_hrf.ppt

Statistical Inference

MatthewBrett

Thresholding: RFT, FDR, SNPM

cbu_spm_course_2007_mb_inference.ppt

Experimental design and optimisation

RikHenson

Factorial designs, conjunctions, blocked/randomised, efficiency

cbu_spm_course_2007_rh_design.ppt

Effective connectivity

James Rowe

Three methods: PPI, SEM, DCM

cbu_spm_course_2007_jr.ppt

Batching

RhodriCusack

Batching with AA

cbu_spm_course_2007_rc_aa.ppt